Software review

SAMMate: a GUI tool for processing short read alignments in SAM/BAM format

Guorong Xu¹, Nan Deng¹, Zhiyu Zhao¹, Thair Judeh¹, Erik Flemington² and Dongxiao Zhu^1,^2,³^*

¹ Department of Computer Science, University of New Orleans, 2000 Lakeshore Drive, New Orleans, LA 70148, USA

² Tulane Cancer Center and Tulane Health Science Center, 1430 Tulane Ave. New Orleans, LA 70112, USA

³ The Research Institute for Children, Children's Hospital, 200 Henry Clay Ave. New Orleans, LA 70118, USA

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Source Code for Biology and Medicine 2011, 6:2 doi:10.1186/1751-0473-6-2

Published: 13 January 2011

Additional file 1:

SAMMate Software Manual. A detailed demonstration of the key features of SAMMate and some user tips.

Format: PDF Size: 1.1MB Download file

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