Software review
A proof of the DBRF-MEGN method, an algorithm for deducing minimum equivalent gene networks
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* Corresponding author: Shuichi Onami sonami@riken.jp
1 Laboratory for Developmental Dynamics, RIKEN Quantitative Biology Center, and Advanced Computational Sciences Department, RIKEN Advanced Science Institute, 1-7-22 Suehirocho, Tsurumi, Yokohama 230-0045, Japan
2 Graduate School of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku, Yokohama 223-8522, Japan
3 Kitano Symbiotic Systems Project, ERATO, Japan Science and Technology Corporation, M31 6A, 6-31-15 Jingumae, Shibuya, Tokyo 150-0001, Japan
4 The Systems Biology Institute, 5-6-9 Shirokanedai, Minato, Tokyo 108-0071, Japan
5 National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
6 Sony Computer Science Laboratories, Inc, 3-14-13 Higashi-gotanda, Shinagawa, Tokyo 141-0022, Japan
Source Code for Biology and Medicine 2011, 6:12 doi:10.1186/1751-0473-6-12
Published: 24 June 2011Additional files
Additional file 1:
The complete source code files, a binary Linux executable file, and the software manual.
Format: ZIP Size: 57KB Download file
Additional file 2:
Supporting text for the applicability of the DBRF-MEGN method to the large-scale expression profiles and the sensitivity of the DBRF-MEGN method to the noise of the expression profiles.
Format: DOC Size: 91KB Download file
This file can be viewed with: Microsoft Word Viewer
Additional file 3:
The MEGNs deduced from large-scale gene expression profiles.
Format: XLS Size: 388KB Download file
This file can be viewed with: Microsoft Excel Viewer