Table 5

Similarity matrix of 10 different phenotypes of drosophila cells

Similarity Matrix

CG10873

CG12284

CG1258

CG17161

CG3733

CG3938

CG7922

CG8114

CG8222

CG9484

CG10873

1.00

0.74

0.85

0.84

0.96

0.96

0.83

0.89

0.92

0.90

CG12284

0.61

1.00

0.75

0.67

0.68

0.69

0.68

0.79

0.77

0.68

CG1258

0.82

0.82

1.00

0.94

0.87

0.83

0.73

0.92

0.92

0.90

CG17161

0.78

0.75

0.85

1.00

0.84

0.81

0.72

0.78

0.84

0.86

CG3733

0.97

0.72

0.91

0.90

1.00

0.95

0.81

0.90

0.94

0.88

CG3938

0.99

0.82

0.88

0.86

0.95

1.00

0.93

0.89

0.98

0.94

CG7922

0.93

0.80

0.80

0.80

0.89

0.96

1.00

0.78

0.92

0.92

CG8114

0.82

0.86

0.93

0.83

0.80

0.80

0.69

1.00

0.89

0.82

CG8222

0.92

0.88

0.96

0.90

0.94

0.93

0.86

0.95

1.00

0.91

CG9484

0.72

0.74

0.87

0.81

0.78

0.81

0.79

0.84

0.83

1.00

Each class is a set of light microscopy images (60×) of drosophila cells with single gene knockdowns. The genes are the class names. The dataset is available at http://ome.grc.nia.nih.gov/iicbu2008/rnai.tar.gz webcite.

Shamir et al. Source Code for Biology and Medicine 2008 3:13   doi:10.1186/1751-0473-3-13